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Sample GSM2113026 Query DataSets for GSM2113026
Status Public on Jul 01, 2016
Title ko_untreated_5
Sample type RNA
 
Source name ko_untreated
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: GLP1-R -/-
agent: untreated
time: control
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
 
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
 
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
 
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
ENSMUSG00000000001_at 9.88261
ENSMUSG00000000003_at 3.62373
ENSMUSG00000000028_at 5.14056
ENSMUSG00000000031_at 4.33749
ENSMUSG00000000037_at 4.18875
ENSMUSG00000000049_at 5.07202
ENSMUSG00000000056_at 6.01888
ENSMUSG00000000058_at 7.51309
ENSMUSG00000000078_at 5.68896
ENSMUSG00000000085_at 6.28943
ENSMUSG00000000088_at 12.13688
ENSMUSG00000000093_at 4.54337
ENSMUSG00000000094_at 4.40408
ENSMUSG00000000103_at 4.00388
ENSMUSG00000000120_at 4.55613
ENSMUSG00000000125_at 3.40698
ENSMUSG00000000126_at 4.49646
ENSMUSG00000000127_at 4.3983
ENSMUSG00000000131_at 8.1738
ENSMUSG00000000134_at 8.0062

Total number of rows: 17204

Table truncated, full table size 503 Kbytes.




Supplementary file Size Download File type/resource
GSM2113026_5.CEL.gz 3.6 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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