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Status
Public on Jul 01, 2016
Title
ko_untreated_6
Sample type
RNA
Source name
ko_untreated
Organism
Mus musculus
Characteristics
strain: CD-1 gender: male genotype/variation: GLP1-R -/- agent: untreated time: control tissue: Brunner’s glands
Extracted molecule
total RNA
Extraction protocol
Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label
biotin
Label protocol
Affymetrix in vitro transcription
Hybridization protocol
Affymetrix EukGE-WS2v5
Scan protocol
Affymetrix cel analysis
Data processing
Bioconductor/R RMA
Submission date
Apr 11, 2016
Last update date
Jul 01, 2016
Contact name
Klaus Stensgaard Frederiksen
Organization name
Novo Nordisk A/S
Department
Molecular Genetics
Street address
Novo Nordisk Park F9.1.07
City
Måløv
ZIP/Postal code
DK-2760
Country
Denmark
Platform ID
GPL20766
Series (1)
GSE80119
Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice
Data table header descriptions
ID_REF
VALUE
Log2 RMA signal
Data table
ID_REF
VALUE
ENSMUSG00000000001_at
9.93628
ENSMUSG00000000003_at
3.57203
ENSMUSG00000000028_at
5.73136
ENSMUSG00000000031_at
4.44436
ENSMUSG00000000037_at
4.14391
ENSMUSG00000000049_at
5.5472
ENSMUSG00000000056_at
5.9866
ENSMUSG00000000058_at
7.45786
ENSMUSG00000000078_at
5.00828
ENSMUSG00000000085_at
6.45888
ENSMUSG00000000088_at
12.38437
ENSMUSG00000000093_at
4.82275
ENSMUSG00000000094_at
4.26578
ENSMUSG00000000103_at
4.01232
ENSMUSG00000000120_at
4.71302
ENSMUSG00000000125_at
3.34816
ENSMUSG00000000126_at
4.51365
ENSMUSG00000000127_at
4.57666
ENSMUSG00000000131_at
8.10584
ENSMUSG00000000134_at
8.23603
Total number of rows: 17204 Table truncated, full table size 503 Kbytes .Supplementary file
Size
Download
File type/resource
GSM2113027_6.CEL.gz
3.9 Mb
(ftp) (http)
CEL
Processed data included within Sample table