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Sample GSM2113028 Query DataSets for GSM2113028
Status Public on Jul 01, 2016
Title wt_exendin (6h)_7
Sample type RNA
 
Source name wt_exendin (6h)
Organism Mus musculus
Characteristics strain: CD-1
gender: male
genotype/variation: wild-type
agent: exendin-4
time: 6h
tissue: Brunner’s glands
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using the standard TRIzol protocol (Invitrogen, Carlsbad, CA), but with subsequent RNA clean-up of the water phase using the RNeasy Qiagen MinElute kit (Qiagen, Germantown, MD). The quality of the RNA was confirmed on the Agilent Bioanalyzer using RNA Nano chips (Agilent Technologies, Santa Clara, CA).
Label biotin
Label protocol Affymetrix in vitro transcription
 
Hybridization protocol Affymetrix EukGE-WS2v5
Scan protocol Affymetrix cel analysis
Data processing Bioconductor/R RMA
 
Submission date Apr 11, 2016
Last update date Jul 01, 2016
Contact name Klaus Stensgaard Frederiksen
Organization name Novo Nordisk A/S
Department Molecular Genetics
Street address Novo Nordisk Park F9.1.07
City Måløv
ZIP/Postal code DK-2760
Country Denmark
 
Platform ID GPL20766
Series (1)
GSE80119 Effects of exendin-4 in Brunner's glands of male GLP-1R-/- and wild-type control mice

Data table header descriptions
ID_REF
VALUE Log2 RMA signal

Data table
ID_REF VALUE
ENSMUSG00000000001_at 9.96356
ENSMUSG00000000003_at 3.65046
ENSMUSG00000000028_at 5.2092
ENSMUSG00000000031_at 4.45699
ENSMUSG00000000037_at 4.41874
ENSMUSG00000000049_at 5.20163
ENSMUSG00000000056_at 5.47589
ENSMUSG00000000058_at 6.51974
ENSMUSG00000000078_at 5.11852
ENSMUSG00000000085_at 6.05449
ENSMUSG00000000088_at 12.45618
ENSMUSG00000000093_at 4.84645
ENSMUSG00000000094_at 4.39773
ENSMUSG00000000103_at 4.48934
ENSMUSG00000000120_at 4.44846
ENSMUSG00000000125_at 3.3175
ENSMUSG00000000126_at 4.57272
ENSMUSG00000000127_at 4.25762
ENSMUSG00000000131_at 8.04915
ENSMUSG00000000134_at 8.08392

Total number of rows: 17204

Table truncated, full table size 502 Kbytes.




Supplementary file Size Download File type/resource
GSM2113028_7.CEL.gz 3.8 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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