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Sample GSM21255 Query DataSets for GSM21255
Status Public on Apr 13, 2004
Title MDAMB436Cy3vsHMECCy5r2
Sample type RNA
 
Channel 1
Source name MDA-MB436 Breast Cancer cell line
Organism Homo sapiens
Extracted molecule total RNA
 
Channel 2
Source name Human Mammary Epithelial Cells
Organism Homo sapiens
Extracted molecule total RNA
 
 
Description The MDA-MB-436 human breast cancer derived cell line was purchased from American Tissue Type Collection and cultured according to the manufacturer's instructions. Cells were solubilized in TRIzol LS and RNA was extracted using the Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 7 ug of total RNA. Human mammary epithelial cells were purchased from Cambrex Bio Science and cultured according to the manufacturer's instructions. Cells were solubilized in TRIzol LS and RNA was extracted using the Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 7 ug of total RNA
 
Submission date Apr 08, 2004
Last update date May 27, 2005
Contact name Brig Mecham
E-mail(s) bmecham@rics.bwh.harvard.edu
Phone 617 732-6265
Fax 617 732-6265
Organization name Harvard Medical School
Street address 20 Shattuck St
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL875
Series (1)
GSE1299 Breast Cancer Cell Line Experiment

Data table header descriptions
ID_REF
Agilent Probe ID
VALUE log ratio (log2 of PRE_VALUE)
PRE_VALUE Ratio of normalized tumor to normal

Data table
ID_REF Agilent Probe ID VALUE PRE_VALUE
18505 2314555 0.0285693 1.02
18506 2005490 1.6088093 3.05
18507 1603132 -0.0291463 0.98
2 2041 -3.8365013 0.07
18508 1569554 0.1243283 1.09
3 223436 -1.7369663 0.30
18509 308427 -1.9434163 0.26
5 450856 -0.1046973 0.93
6 30690 0.9708543 1.96
7 260902 0.3785123 1.30
8 389324 0.3448283 1.27
9 144303 -0.1520033 0.90
18510 1833174 -3.0588943 0.12
18511 3137033 -0.2344653 0.85
18512 1265633 -0.2175913 0.86
18513 24263 -2.9434163 0.13
18514 1921290 0.5459683 1.46
18515 211389 -0.2688173 0.83
18516 4003773 -0.1844253 0.88
18517 2520127 0.8559903 1.81

Total number of rows: 12607

Table truncated, full table size 354 Kbytes.




Supplementary data files not provided

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