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Sample GSM212615 Query DataSets for GSM212615
Status Public on Oct 23, 2007
Title classIIhiMECs B6aireKO rep2
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, B6aireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, B6aireKO jos3482
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (2)
GSE8563 Lymphtoxin pathway effects on thymic medullary epithelial cells
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 552.408567915769
1415671_at 956.860731195796
1415672_at 2537.10856791577
1415673_at 237.671853831352
1415674_a_at 888.579611170613
1415675_at 423.308567915769
1415676_a_at 1479.70303539918
1415677_at 688.002507584056
1415678_at 1841.77695088413
1415679_at 2698.00856791577
1415680_at 332.729950775668
1415681_at 170.632969623386
1415682_at 258.449306382323
1415683_at 2647.80856791577
1415684_at 301.091422515631
1415685_at 475.378263424904
1415686_at 2289.32137578262
1415687_a_at 6716.44101297279
1415688_at 1242.07832745838
1415689_s_at 572.422863661812

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212615.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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