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Sample GSM212630 Query DataSets for GSM212630
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireWT rep2
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireWT
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireWT jos3129
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 381.107841615771
1415671_at 812.896023709832
1415672_at 2694.2125906376
1415673_at 386.693725848424
1415674_a_at 715.522439339746
1415675_at 488.72648959265
1415676_a_at 2058.88173257087
1415677_at 445.667521126358
1415678_at 1191.40094699831
1415679_at 3183.08281524732
1415680_at 316.65856791577
1415681_at 366.370191874744
1415682_at 205.103452413136
1415683_at 2538.13022247971
1415684_at 342.820400109521
1415685_at 255.494048714507
1415686_at 3241.47592600436
1415687_a_at 4652.45856791578
1415688_at 2098.84849565887
1415689_s_at 542.738335202705

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212630.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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