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Sample GSM212631 Query DataSets for GSM212631
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireWT rep3
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireWT
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireWT jos3380
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 405.862428055916
1415671_at 1009.88491672951
1415672_at 2063.06421937198
1415673_at 413.039527275457
1415674_a_at 630.165727184284
1415675_at 373.953337187544
1415676_a_at 2956.62292019133
1415677_at 290.82962443284
1415678_at 1210.29668470881
1415679_at 3747.97721565962
1415680_at 290.838739491763
1415681_at 393.461815644236
1415682_at 204.202890459425
1415683_at 2856.66460520551
1415684_at 278.65856791577
1415685_at 319.136691789605
1415686_at 1767.25856791577
1415687_a_at 4127.56693990839
1415688_at 1428.81763520931
1415689_s_at 466.30856791577

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212631.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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