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Sample GSM212638 Query DataSets for GSM212638
Status Public on Jul 22, 2008
Title classIIhiMECs NODaireWT rep2
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, NODaireWT
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: NOD
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, NODaireWT jos3786
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 301.28762369717
1415671_at 963.953920854253
1415672_at 2296.80856791577
1415673_at 277.828414027643
1415674_a_at 581.167472676986
1415675_at 315.325621787677
1415676_a_at 2467.30856791577
1415677_at 353.258567915769
1415678_at 1065.27202183204
1415679_at 3015.66265178901
1415680_at 301.8594115134
1415681_at 256.163754324184
1415682_at 224.466073224005
1415683_at 2883.29647714864
1415684_at 266.176781075377
1415685_at 115.209693212771
1415686_at 2148.91429974753
1415687_a_at 4872.36272033365
1415688_at 1662.64963829079
1415689_s_at 484.956562272337

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212638.CEL.gz 4.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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