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Sample GSM212641 Query DataSets for GSM212641
Status Public on Jul 22, 2008
Title classIIhiMECs NODaireKO rep2
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, NODaireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: NOD
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, NODaireKO jos3787
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) cbdm@hms.harvard.edu
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 273.627205608559
1415671_at 929.007274682585
1415672_at 1977.60856791577
1415673_at 251.858567915769
1415674_a_at 669.122445210795
1415675_at 377.401022475153
1415676_a_at 1992.11755215272
1415677_at 348.401810077532
1415678_at 1023.8876518107
1415679_at 3602.44599784624
1415680_at 259.489003616424
1415681_at 226.558818748076
1415682_at 174.669372498456
1415683_at 3206.05856791577
1415684_at 240.884276063406
1415685_at 132.919216074084
1415686_at 1842.40977268478
1415687_a_at 4130.1943995248
1415688_at 1501.92714933921
1415689_s_at 477.272005388952

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212641.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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