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Sample GSM2131799 Query DataSets for GSM2131799
Status Public on Apr 26, 2016
Title HFD CTRL biological rep. 2
Sample type RNA
 
Source name kidney, HFD, CTRL mice
Organism Mus musculus
Characteristics tissue: Kidney
genotype: control
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Sense target biotin labeling according to the Mouse 2.0 ST Whole Gene Array from Affymetrix
 
Hybridization protocol Following fragmentation, 4.25 ug of DNA were hybridized for 17 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the Affymetrix Scanner 3000-7G.
Data processing The data were analyzed at the Life Sciences Training Facility of the University of Basel, using the PARTEK Software Suite and Bioconductor.
 
Submission date Apr 25, 2016
Last update date Apr 26, 2016
Contact name Christoph Handschin
Organization name Biozentrum, University of Basel
Street address Spitalstrasse 41
City Basel
ZIP/Postal code 4056
Country Switzerland
 
Platform ID GPL16570
Series (1)
GSE80618 Loss of renal tubular PGC-1α exacerbates diet-induced renal steatosis and age-related urinary sodium excretion in mice

Data table header descriptions
ID_REF
VALUE normalized

Data table
ID_REF VALUE
17539979 9.64083
17544453 9.09029
17443310 11.7782
17517390 9.80404
17549118 3.59407
17225775 7.23694
17386297 7.78637
17471166 10.9322
17446185 10.4033
17234436 11.3896
17478883 9.74806
17386396 10.0187
17355169 9.24401
17297750 10.2313
17432596 9.37968
17364932 10.4549
17391608 11.4493
17280498 10.7064
17233039 8.6686
17476288 8.75234

Total number of rows: 41345

Table truncated, full table size 681 Kbytes.




Supplementary file Size Download File type/resource
GSM2131799_HWT377_MoGe2_251012_MoGene-2_0-st_.CEL.gz 9.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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