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GEO accession:
Sample GSM214798
Query DataSets for GSM214798
Status
Public on Jul 31, 2008
Title
ART11
Sample type
RNA
Source name
Mouse spleen at 4 month
Organism
Mus musculus
Characteristics
Male DBA-1/BALB/c-Il1rn -/- F2 art11
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol with Fluidics Station 450
Scan protocol
Standard Affymetrix protocol with GeneChip Scanner 3000
Description
Gene expression data
Data processing
The data were analyzed with Expressiojn Console 1.1 using default MAS5 method. The target intensity was 500.
Submission date
Aug 02, 2007
Last update date
Aug 28, 2018
Contact name
Jian Yan
E-mail(s)
jyan1@utmem.edu
Phone
901-448-7830
Organization name
University of Tennessee Health Science Center
Department
Orthopedics Surgery
Lab
Weikuan Gu
Street address
956 Court Ave
City
Memphis
State/province
TN
ZIP/Postal code
38163
Country
USA
Platform ID
GPL1261
Series (1)
GSE8690
Microarray analysis identifies distinct subpopulations of arthritic mice deficient for interleukin 1 receptor antagonist
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
MAS5-calculated signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P) , absent (A) , or marginal (M)
DETECTION P-VALUE
P value that indicates the significance levell of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
107.1146
P
0.004017214
AFFX-BioB-M_at
163.4038
P
0.000258358
AFFX-BioB-3_at
81.63836
M
0.06292927
AFFX-BioC-5_at
543.6554
P
7.01E-05
AFFX-BioC-3_at
699.2133
P
0.000146581
AFFX-BioDn-5_at
1146.829
P
6.02E-05
AFFX-BioDn-3_at
3093.141
P
8.14E-05
AFFX-CreX-5_at
8735.07
P
4.43E-05
AFFX-CreX-3_at
11355.79
P
4.43E-05
AFFX-DapX-5_at
11.86338
A
0.5445875
AFFX-DapX-M_at
40.33894
A
0.1658614
AFFX-DapX-3_at
5.57013
A
0.9273001
AFFX-LysX-5_at
25.56297
A
0.2165041
AFFX-LysX-M_at
5.654262
A
0.9323215
AFFX-LysX-3_at
25.34015
A
0.1658614
AFFX-PheX-5_at
3.547891
A
0.9323215
AFFX-PheX-M_at
5.111069
A
0.7609373
AFFX-PheX-3_at
54.78348
A
0.2507957
AFFX-ThrX-5_at
7.366675
A
0.9535185
AFFX-ThrX-M_at
22.81309
A
0.4113802
Total number of rows:
45101
Table truncated, full table size
1432 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM214798.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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