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GEO accession:
Sample GSM214973
Query DataSets for GSM214973
Status
Public on Jul 31, 2008
Title
NON15
Sample type
RNA
Source name
Mouse spleen at 4 month
Organism
Mus musculus
Characteristics
Male DBA-1/BALB/c-Il1rn -/- F2 a=Non15
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol with Fluidics Station 450
Scan protocol
Standard Affymetrix protocol with GeneChip Scanner 3000
Description
Gene expression data
Data processing
The data were analyzed with Expressiojn Console 1.1 using default MAS5 method. The target intensity was 500.
Submission date
Aug 02, 2007
Last update date
Aug 28, 2018
Contact name
Jian Yan
E-mail(s)
jyan1@utmem.edu
Phone
901-448-7830
Organization name
University of Tennessee Health Science Center
Department
Orthopedics Surgery
Lab
Weikuan Gu
Street address
956 Court Ave
City
Memphis
State/province
TN
ZIP/Postal code
38163
Country
USA
Platform ID
GPL1261
Series (1)
GSE8690
Microarray analysis identifies distinct subpopulations of arthritic mice deficient for interleukin 1 receptor antagonist
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
MAS5-calculated signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P) , absent (A) , or marginal (M)
DETECTION P-VALUE
P value that indicates the significance levell of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
244.4271
P
0.00618711
AFFX-BioB-M_at
459.9794
P
0.002022599
AFFX-BioB-3_at
272.0904
P
0.01667011
AFFX-BioC-5_at
1006.106
P
8.14E-05
AFFX-BioC-3_at
1540.449
P
0.00010954
AFFX-BioDn-5_at
1794.245
P
7.01E-05
AFFX-BioDn-3_at
4743.125
P
7.01E-05
AFFX-CreX-5_at
10810.68
P
5.17E-05
AFFX-CreX-3_at
14262.65
P
4.43E-05
AFFX-DapX-5_at
25.9442
A
0.5148901
AFFX-DapX-M_at
56.6747
A
0.313723
AFFX-DapX-3_at
13.73476
A
0.8341386
AFFX-LysX-5_at
7.999743
A
0.8341386
AFFX-LysX-M_at
20.89474
A
0.8148693
AFFX-LysX-3_at
48.83263
A
0.3406612
AFFX-PheX-5_at
2.001458
A
0.8910214
AFFX-PheX-M_at
6.485434
A
0.9370707
AFFX-PheX-3_at
31.39215
A
0.5
AFFX-ThrX-5_at
10.46185
A
0.9663227
AFFX-ThrX-M_at
5.356525
A
0.9105219
Total number of rows:
45101
Table truncated, full table size
1419 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM214973.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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