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GEO accession:
Sample GSM214976
Query DataSets for GSM214976
Status
Public on Jul 31, 2008
Title
NON18
Sample type
RNA
Source name
Mouse spleen at 4 month
Organism
Mus musculus
Characteristics
Male DBA-1/BALB/c-Il1rn -/- F2 a=Non18
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Standard Affymetrix protocol
Hybridization protocol
Standard Affymetrix protocol with Fluidics Station 450
Scan protocol
Standard Affymetrix protocol with GeneChip Scanner 3000
Description
Gene expression data
Data processing
The data were analyzed with Expressiojn Console 1.1 using default MAS5 method. The target intensity was 500.
Submission date
Aug 02, 2007
Last update date
Aug 28, 2018
Contact name
Jian Yan
E-mail(s)
jyan1@utmem.edu
Phone
901-448-7830
Organization name
University of Tennessee Health Science Center
Department
Orthopedics Surgery
Lab
Weikuan Gu
Street address
956 Court Ave
City
Memphis
State/province
TN
ZIP/Postal code
38163
Country
USA
Platform ID
GPL1261
Series (1)
GSE8690
Microarray analysis identifies distinct subpopulations of arthritic mice deficient for interleukin 1 receptor antagonist
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
MAS5-calculated signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P) , absent (A) , or marginal (M)
DETECTION P-VALUE
P value that indicates the significance levell of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
281.2542
P
0.001101968
AFFX-BioB-M_at
590.49
P
7.01E-05
AFFX-BioB-3_at
431.1566
P
0.000258358
AFFX-BioC-5_at
1395.453
P
5.17E-05
AFFX-BioC-3_at
2039.249
P
4.43E-05
AFFX-BioDn-5_at
2850.832
P
4.43E-05
AFFX-BioDn-3_at
6196.168
P
5.17E-05
AFFX-CreX-5_at
14970.91
P
5.17E-05
AFFX-CreX-3_at
19253.45
P
4.43E-05
AFFX-DapX-5_at
29.05751
A
0.4851099
AFFX-DapX-M_at
34.87201
A
0.5445875
AFFX-DapX-3_at
4.532858
A
0.9931294
AFFX-LysX-5_at
23.45944
A
0.4851099
AFFX-LysX-M_at
44.35629
A
0.7248541
AFFX-LysX-3_at
18.25179
A
0.6174008
AFFX-PheX-5_at
6.761186
A
0.8047336
AFFX-PheX-M_at
2.988576
A
0.9634309
AFFX-PheX-3_at
62.97086
A
0.3270795
AFFX-ThrX-5_at
11.04184
A
0.8246717
AFFX-ThrX-M_at
37.58461
A
0.4702405
Total number of rows:
45101
Table truncated, full table size
1426 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM214976.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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