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Sample GSM219325 Query DataSets for GSM219325
Status Public on Nov 19, 2007
Title tumorigenic population of MMTV-Wnt-1 breast tumor, Mouse TG1
Sample type RNA
 
Source name breast tumor
Organism Mus musculus
Characteristics tumorigenic population (CD24+Thy+CD45-) of MMTV-Wnt-1 tumor isolated using fluorescence activated cell sorting
Extracted molecule total RNA
Extraction protocol Using RNAqueous-Micro (Ambion #1931).
Label biotin
Label protocol Total RNA was first amplified. Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized according to the manufacturer's instructions.
Scan protocol standard Affymetrix procedures
Description tumorigenic population (CD24+Thy+CD45-) of MMTV-Wnt-1 tumor isolated using fluorescence activated cell sorting
Data processing RMA
 
Submission date Aug 20, 2007
Last update date Aug 28, 2018
Contact name Xinhao Wang
E-mail(s) xinhao.wang@oncomed.com
Phone 650-995-8211
Organization name OncoMed Pharmaceuticals Inc
Street address 800 Chesapeake
City Redwood City
State/province CA
ZIP/Postal code 94063
Country USA
 
Platform ID GPL1261
Series (1)
GSE8828 Isolation and molecular characterization of cancer stem cells in MMTVWnt-1 murine breast tumors
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1437726_x_at 12.54629377
1434366_x_at 12.58274515
1420465_s_at 7.738707325
1436996_x_at 11.93684847
1449434_at 7.298661246
1439426_x_at 10.81330785
1436905_x_at 12.16202934
1448591_at 11.8743639
1416111_at 11.87667862
1419872_at 12.47412725
1448929_at 10.06412912
1450430_at 10.64722104
1423547_at 11.53016394
1450648_s_at 11.51868013
1422124_a_at 10.21003737
1419684_at 10.87723178
1450792_at 10.06242651
1435144_at 9.733003147
1444040_at 9.008027953
1419873_s_at 11.15980665

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM219325.CEL.gz 3.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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