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Sample GSM219326 Query DataSets for GSM219326
Status Public on Nov 19, 2007
Title tumorigenic population of MMTV-Wnt-1 breast tumor, Mouse TG2
Sample type RNA
 
Source name breast tumor
Organism Mus musculus
Characteristics tumorigenic population (CD24+Thy+CD45-) of MMTV-Wnt-1 tumor isolated using fluorescence activated cell sorting
Extracted molecule total RNA
Extraction protocol Using RNAqueous-Micro (Ambion #1931).
Label biotin
Label protocol Total RNA was first amplified. Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized according to the manufacturer's instructions.
Scan protocol standard Affymetrix procedures
Description tumorigenic population (CD24+Thy+CD45-) of MMTV-Wnt-1 tumor isolated using fluorescence activated cell sorting
Data processing RMA
 
Submission date Aug 20, 2007
Last update date Aug 28, 2018
Contact name Xinhao Wang
E-mail(s) xinhao.wang@oncomed.com
Phone 650-995-8211
Organization name OncoMed Pharmaceuticals Inc
Street address 800 Chesapeake
City Redwood City
State/province CA
ZIP/Postal code 94063
Country USA
 
Platform ID GPL1261
Series (1)
GSE8828 Isolation and molecular characterization of cancer stem cells in MMTVWnt-1 murine breast tumors
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1437726_x_at 11.84681997
1434366_x_at 11.89199083
1420465_s_at 9.617733815
1436996_x_at 10.58525038
1449434_at 10.83028314
1439426_x_at 9.406736166
1436905_x_at 10.88283491
1448591_at 10.96801961
1416111_at 10.42251602
1419872_at 11.29104745
1448929_at 8.663067378
1450430_at 8.71553077
1423547_at 9.121073917
1450648_s_at 10.01081774
1422124_a_at 7.760895927
1419684_at 9.179180356
1450792_at 8.685065899
1435144_at 7.345783674
1444040_at 7.852596147
1419873_s_at 9.235808336

Total number of rows: 45101

Table truncated, full table size 1025 Kbytes.




Supplementary file Size Download File type/resource
GSM219326.CEL.gz 3.3 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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