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Sample GSM219327 Query DataSets for GSM219327
Status Public on Nov 19, 2007
Title tumorigenic population of MMTV-Wnt-1 breast tumor, Mouse TG3
Sample type RNA
 
Source name breast tumor
Organism Mus musculus
Characteristics tumorigenic population (CD24+Thy+CD45-) of MMTV-Wnt-1 tumor isolated using fluorescence activated cell sorting
Extracted molecule total RNA
Extraction protocol Using RNAqueous-Micro (Ambion #1931).
Label biotin
Label protocol Total RNA was first amplified. Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Following fragmentation, 15 ug of cRNA were hybridized according to the manufacturer's instructions.
Scan protocol standard Affymetrix procedures
Description tumorigenic population (CD24+Thy+CD45-) of MMTV-Wnt-1 tumor isolated using fluorescence activated cell sorting
Data processing RMA
 
Submission date Aug 20, 2007
Last update date Aug 28, 2018
Contact name Xinhao Wang
E-mail(s) xinhao.wang@oncomed.com
Phone 650-995-8211
Organization name OncoMed Pharmaceuticals Inc
Street address 800 Chesapeake
City Redwood City
State/province CA
ZIP/Postal code 94063
Country USA
 
Platform ID GPL1261
Series (1)
GSE8828 Isolation and molecular characterization of cancer stem cells in MMTVWnt-1 murine breast tumors
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal intensity

Data table
ID_REF VALUE
1437726_x_at 8.089139441
1434366_x_at 8.008337033
1420465_s_at 9.305079212
1436996_x_at 7.573051736
1449434_at 8.857958666
1439426_x_at 6.539047403
1436905_x_at 7.275774929
1448591_at 6.862046159
1416111_at 7.337239253
1419872_at 7.119604048
1448929_at 5.423191041
1450430_at 7.007947879
1423547_at 6.474859287
1450648_s_at 6.556216212
1422124_a_at 3.815121094
1419684_at 6.277678095
1450792_at 4.520245018
1435144_at 4.447834055
1444040_at 4.467345723
1419873_s_at 5.338725102

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM219327.CEL.gz 3.4 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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