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Sample GSM225347 Query DataSets for GSM225347
Status Public on Sep 01, 2007
Title D08 12h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1819.43 P 0.00110197
AFFX-BioB-M_at 4283.06 P 0.000146581
AFFX-BioB-3_at 1340.67 P 0.00179591
AFFX-BioC-5_at 5456.82 P 0.000224668
AFFX-BioC-3_at 4190.17 P 7.00668e-05
AFFX-BioDn-5_at 4588.07 P 5.16732e-05
AFFX-BioDn-3_at 31695.1 P 8.14279e-05
AFFX-CreX-5_at 42792.4 P 4.42873e-05
AFFX-CreX-3_at 63005.7 P 4.42873e-05
AFFX-DapX-5_at 116.47 A 0.131361
AFFX-DapX-M_at 181.895 A 0.60308
AFFX-DapX-3_at 26.0814 A 0.910522
AFFX-LysX-5_at 15.9644 A 0.686277
AFFX-LysX-M_at 224.213 A 0.544587
AFFX-LysX-3_at 91.9451 A 0.425962
AFFX-PheX-5_at 24.1017 A 0.891021
AFFX-PheX-M_at 17.5548 A 0.969024
AFFX-PheX-3_at 112.718 A 0.60308
AFFX-ThrX-5_at 33.427 A 0.868639
AFFX-ThrX-M_at 103.358 A 0.51489

Total number of rows: 22283

Table truncated, full table size 671 Kbytes.




Supplementary file Size Download File type/resource
GSM225347.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225347.EXP.gz 476 b (ftp)(http) EXP
Processed data included within Sample table

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