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Sample GSM225350 Query DataSets for GSM225350
Status Public on Sep 01, 2007
Title D02 3h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2860.2 P 0.00179591
AFFX-BioB-M_at 5515.06 P 0.00010954
AFFX-BioB-3_at 2414.26 P 0.00359458
AFFX-BioC-5_at 6725.36 P 0.000169227
AFFX-BioC-3_at 5309.27 P 7.00668e-05
AFFX-BioDn-5_at 6407.67 P 7.00668e-05
AFFX-BioDn-3_at 41104.9 P 0.000126798
AFFX-CreX-5_at 46966.2 P 4.42873e-05
AFFX-CreX-3_at 62182.6 P 4.42873e-05
AFFX-DapX-5_at 185.684 A 0.195266
AFFX-DapX-M_at 131.237 A 0.48511
AFFX-DapX-3_at 39.5515 A 0.987453
AFFX-LysX-5_at 16.9391 A 0.737173
AFFX-LysX-M_at 29.3658 A 0.834139
AFFX-LysX-3_at 86.8422 A 0.425962
AFFX-PheX-5_at 32.8298 A 0.910522
AFFX-PheX-M_at 79.0796 A 0.804734
AFFX-PheX-3_at 103.43 A 0.672921
AFFX-ThrX-5_at 39.1686 A 0.910522
AFFX-ThrX-M_at 170.081 A 0.51489

Total number of rows: 22283

Table truncated, full table size 666 Kbytes.




Supplementary file Size Download File type/resource
GSM225350.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225350.EXP.gz 478 b (ftp)(http) EXP
Processed data included within Sample table

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