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Sample GSM225356 Query DataSets for GSM225356
Status Public on Sep 01, 2007
Title D04 0h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1804.58 P 0.00110197
AFFX-BioB-M_at 4138.67 P 7.00668e-05
AFFX-BioB-3_at 2488.61 P 0.000258358
AFFX-BioC-5_at 7068.48 P 0.000126798
AFFX-BioC-3_at 5148.66 P 7.00668e-05
AFFX-BioDn-5_at 5195.64 P 4.42873e-05
AFFX-BioDn-3_at 32395 P 9.4506e-05
AFFX-CreX-5_at 46134.3 P 4.42873e-05
AFFX-CreX-3_at 69912.8 P 4.42873e-05
AFFX-DapX-5_at 18.294 A 0.645547
AFFX-DapX-M_at 160.256 A 0.239063
AFFX-DapX-3_at 106.315 A 0.891021
AFFX-LysX-5_at 167.094 A 0.300606
AFFX-LysX-M_at 54.2416 A 0.772364
AFFX-LysX-3_at 56.6308 A 0.804734
AFFX-PheX-5_at 75.5471 A 0.686277
AFFX-PheX-M_at 32.7063 A 0.883887
AFFX-PheX-3_at 110.474 A 0.52976
AFFX-ThrX-5_at 25.5368 A 0.876428
AFFX-ThrX-M_at 26.352 A 0.794268

Total number of rows: 22283

Table truncated, full table size 669 Kbytes.




Supplementary file Size Download File type/resource
GSM225356.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225356.EXP.gz 474 b (ftp)(http) EXP
Processed data included within Sample table

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