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Sample GSM225358 Query DataSets for GSM225358
Status Public on Sep 01, 2007
Title D04 3h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1714.8 P 0.00762003
AFFX-BioB-M_at 3309.11 P 0.000126798
AFFX-BioB-3_at 1804.68 P 0.0012475
AFFX-BioC-5_at 5071.57 P 0.000195116
AFFX-BioC-3_at 4268.23 P 0.000146581
AFFX-BioDn-5_at 4134.31 P 9.4506e-05
AFFX-BioDn-3_at 26830.6 P 0.000258358
AFFX-CreX-5_at 33864.1 P 4.42873e-05
AFFX-CreX-3_at 63997.7 P 4.42873e-05
AFFX-DapX-5_at 115.803 A 0.327079
AFFX-DapX-M_at 101.235 A 0.48511
AFFX-DapX-3_at 20.3497 A 0.971543
AFFX-LysX-5_at 92.1339 A 0.712257
AFFX-LysX-M_at 175.426 A 0.699394
AFFX-LysX-3_at 80.8094 A 0.425962
AFFX-PheX-5_at 33.8844 A 0.814869
AFFX-PheX-M_at 29.1187 A 0.883887
AFFX-PheX-3_at 279.582 A 0.440646
AFFX-ThrX-5_at 57.8966 A 0.574038
AFFX-ThrX-M_at 50.3457 A 0.659339

Total number of rows: 22283

Table truncated, full table size 666 Kbytes.




Supplementary file Size Download File type/resource
GSM225358.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM225358.EXP.gz 473 b (ftp)(http) EXP
Processed data included within Sample table

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