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Sample GSM225360 Query DataSets for GSM225360
Status Public on Sep 01, 2007
Title D06 6h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 3009.4 P 0.000389797
AFFX-BioB-M_at 9186.79 P 6.02111e-05
AFFX-BioB-3_at 5191.61 P 8.14279e-05
AFFX-BioC-5_at 11258.6 P 7.00668e-05
AFFX-BioC-3_at 8562.97 P 4.42873e-05
AFFX-BioDn-5_at 13837.4 P 4.42873e-05
AFFX-BioDn-3_at 57820.3 P 6.02111e-05
AFFX-CreX-5_at 84244.4 P 4.42873e-05
AFFX-CreX-3_at 133011 P 4.42873e-05
AFFX-DapX-5_at 15.5267 A 0.860518
AFFX-DapX-M_at 130.785 A 0.470241
AFFX-DapX-3_at 20.5999 A 0.987453
AFFX-LysX-5_at 146.961 A 0.51489
AFFX-LysX-M_at 41.5536 A 0.659339
AFFX-LysX-3_at 124.959 A 0.58862
AFFX-PheX-5_at 24.2122 A 0.904333
AFFX-PheX-M_at 14.6815 A 0.98333
AFFX-PheX-3_at 428.82 A 0.139482
AFFX-ThrX-5_at 29.4964 A 0.937071
AFFX-ThrX-M_at 151.517 A 0.455413

Total number of rows: 22283

Table truncated, full table size 667 Kbytes.




Supplementary file Size Download File type/resource
GSM225360.CEL.gz 3.2 Mb (ftp)(http) CEL
GSM225360.EXP.gz 475 b (ftp)(http) EXP
Processed data included within Sample table

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