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Sample GSM225370 Query DataSets for GSM225370
Status Public on Sep 01, 2007
Title D10 0h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1657 P 0.00255552
AFFX-BioB-M_at 2710.65 P 0.000146581
AFFX-BioB-3_at 1431.27 P 0.000581214
AFFX-BioC-5_at 4571.46 P 0.000195116
AFFX-BioC-3_at 3311.8 P 8.14279e-05
AFFX-BioDn-5_at 3938.9 P 8.14279e-05
AFFX-BioDn-3_at 22276.7 P 0.000224668
AFFX-CreX-5_at 34194 P 4.42873e-05
AFFX-CreX-3_at 47999.4 P 4.42873e-05
AFFX-DapX-5_at 170.498 A 0.327079
AFFX-DapX-M_at 43.7091 A 0.645547
AFFX-DapX-3_at 16.413 A 0.868639
AFFX-LysX-5_at 90.2261 A 0.368438
AFFX-LysX-M_at 31.4385 A 0.749204
AFFX-LysX-3_at 58.5955 A 0.39692
AFFX-PheX-5_at 14.2935 A 0.953518
AFFX-PheX-M_at 146.862 A 0.724854
AFFX-PheX-3_at 58.1864 A 0.804734
AFFX-ThrX-5_at 26.2548 A 0.966323
AFFX-ThrX-M_at 137.687 A 0.574038

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225370.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM225370.EXP.gz 474 b (ftp)(http) EXP
Processed data included within Sample table

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