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Sample GSM225373 Query DataSets for GSM225373
Status Public on Sep 01, 2007
Title D10 24h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1532.74 P 0.0012475
AFFX-BioB-M_at 2721.04 P 4.42873e-05
AFFX-BioB-3_at 1590.5 P 0.0012475
AFFX-BioC-5_at 4482.74 P 0.000126798
AFFX-BioC-3_at 3535.69 P 7.00668e-05
AFFX-BioDn-5_at 4009.75 P 4.42873e-05
AFFX-BioDn-3_at 23358.7 P 0.000146581
AFFX-CreX-5_at 34424.8 P 4.42873e-05
AFFX-CreX-3_at 49612.8 P 4.42873e-05
AFFX-DapX-5_at 126.275 A 0.139482
AFFX-DapX-M_at 189.336 A 0.131361
AFFX-DapX-3_at 36.9264 A 0.969024
AFFX-LysX-5_at 16.4286 A 0.834139
AFFX-LysX-M_at 60.0095 A 0.574038
AFFX-LysX-3_at 63.7157 A 0.48511
AFFX-PheX-5_at 8.20586 A 0.98333
AFFX-PheX-M_at 22.9246 A 0.860518
AFFX-PheX-3_at 67.4369 A 0.631562
AFFX-ThrX-5_at 25.3465 A 0.916408
AFFX-ThrX-M_at 40.9341 A 0.749204

Total number of rows: 22283

Table truncated, full table size 672 Kbytes.




Supplementary file Size Download File type/resource
GSM225373.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225373.EXP.gz 473 b (ftp)(http) EXP
Processed data included within Sample table

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