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Sample GSM225376 Query DataSets for GSM225376
Status Public on Sep 01, 2007
Title D01 12h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1562.55 P 0.00227496
AFFX-BioB-M_at 3697.05 P 0.000126798
AFFX-BioB-3_at 1816.15 P 0.000195116
AFFX-BioC-5_at 5014.63 P 0.000126798
AFFX-BioC-3_at 4760.58 P 7.00668e-05
AFFX-BioDn-5_at 5243.67 P 5.16732e-05
AFFX-BioDn-3_at 26262.5 P 8.14279e-05
AFFX-CreX-5_at 36036 P 4.42873e-05
AFFX-CreX-3_at 54928.7 P 4.42873e-05
AFFX-DapX-5_at 167.792 A 0.195266
AFFX-DapX-M_at 307.48 A 0.227636
AFFX-DapX-3_at 13.0093 A 0.98333
AFFX-LysX-5_at 10.9658 A 0.937071
AFFX-LysX-M_at 189.907 A 0.470241
AFFX-LysX-3_at 165.283 A 0.287743
AFFX-PheX-5_at 8.94818 A 0.976071
AFFX-PheX-M_at 30.7714 A 0.876428
AFFX-PheX-3_at 57.9889 A 0.699394
AFFX-ThrX-5_at 49.112 A 0.843268
AFFX-ThrX-M_at 23.2916 A 0.699394

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225376.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225376.EXP.gz 474 b (ftp)(http) EXP
Processed data included within Sample table

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