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Sample GSM225378 Query DataSets for GSM225378
Status Public on Sep 01, 2007
Title D01 24h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Aug 14, 2011
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1992.61 P 0.00179591
AFFX-BioB-M_at 3474.43 P 6.02111e-05
AFFX-BioB-3_at 1569.29 P 0.000445901
AFFX-BioC-5_at 5024.64 P 9.4506e-05
AFFX-BioC-3_at 4098.59 P 6.02111e-05
AFFX-BioDn-5_at 4843.96 P 5.16732e-05
AFFX-BioDn-3_at 26105.7 P 8.14279e-05
AFFX-CreX-5_at 36648.4 P 4.42873e-05
AFFX-CreX-3_at 52318.3 P 4.42873e-05
AFFX-DapX-5_at 81.0651 A 0.354453
AFFX-DapX-M_at 123.096 A 0.313723
AFFX-DapX-3_at 13.3293 A 0.984817
AFFX-LysX-5_at 26.8314 A 0.559354
AFFX-LysX-M_at 138.928 A 0.574038
AFFX-LysX-3_at 30.0159 A 0.48511
AFFX-PheX-5_at 8.70957 A 0.979978
AFFX-PheX-M_at 10.491 A 0.921998
AFFX-PheX-3_at 149.85 A 0.574038
AFFX-ThrX-5_at 23.1173 A 0.868639
AFFX-ThrX-M_at 22.4376 A 0.686277

Total number of rows: 22283

Table truncated, full table size 672 Kbytes.




Supplementary file Size Download File type/resource
GSM225378.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM225378.EXP.gz 469 b (ftp)(http) EXP
Processed data included within Sample table

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