NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM225380 Query DataSets for GSM225380
Status Public on Sep 01, 2007
Title D01 3h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 28, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1541.06 P 0.0012475
AFFX-BioB-M_at 3783.46 P 5.16732e-05
AFFX-BioB-3_at 1553.82 P 0.000126798
AFFX-BioC-5_at 5602.4 P 8.14279e-05
AFFX-BioC-3_at 4536.67 P 5.16732e-05
AFFX-BioDn-5_at 5338.31 P 4.42873e-05
AFFX-BioDn-3_at 28955.8 P 0.00010954
AFFX-CreX-5_at 43525.8 P 4.42873e-05
AFFX-CreX-3_at 61352.5 P 4.42873e-05
AFFX-DapX-5_at 19.3051 A 0.5
AFFX-DapX-M_at 134.757 A 0.340661
AFFX-DapX-3_at 29.0258 A 0.760937
AFFX-LysX-5_at 86.6019 A 0.340661
AFFX-LysX-M_at 190.813 A 0.58862
AFFX-LysX-3_at 111.236 A 0.368438
AFFX-PheX-5_at 17.5144 A 0.910522
AFFX-PheX-M_at 30.1556 A 0.910522
AFFX-PheX-3_at 94.9082 A 0.425962
AFFX-ThrX-5_at 39.8786 A 0.760937
AFFX-ThrX-M_at 40.5372 A 0.617401

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225380.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225380.EXP.gz 467 b (ftp)(http) EXP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap