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Sample GSM225645 Query DataSets for GSM225645
Status Public on Sep 01, 2007
Title D01 3h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2192.27 P 0.00556451
AFFX-BioB-M_at 3261.53 P 9.4506e-05
AFFX-BioB-3_at 1945.76 P 0.000972149
AFFX-BioC-5_at 5657.13 P 0.000146581
AFFX-BioC-3_at 3982.53 P 0.000146581
AFFX-BioDn-5_at 4358.77 P 5.16732e-05
AFFX-BioDn-3_at 28578.4 P 8.14279e-05
AFFX-CreX-5_at 40987.5 P 4.42873e-05
AFFX-CreX-3_at 59592.7 P 4.42873e-05
AFFX-DapX-5_at 203.235 A 0.185131
AFFX-DapX-M_at 90.4197 A 0.5
AFFX-DapX-3_at 50.3798 A 0.937071
AFFX-LysX-5_at 9.39805 A 0.986189
AFFX-LysX-M_at 434.915 A 0.275146
AFFX-LysX-3_at 275.85 A 0.123572
AFFX-PheX-5_at 10.9197 A 0.98333
AFFX-PheX-M_at 35.4401 A 0.834139
AFFX-PheX-3_at 228.941 A 0.617401
AFFX-ThrX-5_at 46.038 A 0.794268
AFFX-ThrX-M_at 62.2375 A 0.631562

Total number of rows: 22283

Table truncated, full table size 667 Kbytes.




Supplementary file Size Download File type/resource
GSM225645.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM225645.EXP.gz 467 b (ftp)(http) EXP
Processed data included within Sample table

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