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Sample GSM225649 Query DataSets for GSM225649
Status Public on Sep 01, 2007
Title D01 6h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2091.65 P 0.000753643
AFFX-BioB-M_at 3932.42 P 9.4506e-05
AFFX-BioB-3_at 2207.53 P 0.000195116
AFFX-BioC-5_at 6641.58 P 0.000126798
AFFX-BioC-3_at 4960.84 P 7.00668e-05
AFFX-BioDn-5_at 5507.89 P 4.42873e-05
AFFX-BioDn-3_at 31346.1 P 0.000126798
AFFX-CreX-5_at 45146.5 P 4.42873e-05
AFFX-CreX-3_at 63991.8 P 4.42873e-05
AFFX-DapX-5_at 101.805 A 0.559354
AFFX-DapX-M_at 89.0216 A 0.470241
AFFX-DapX-3_at 30.9033 A 0.966323
AFFX-LysX-5_at 98.6289 A 0.262827
AFFX-LysX-M_at 74.9496 A 0.631562
AFFX-LysX-3_at 221.194 A 0.175328
AFFX-PheX-5_at 35.9236 A 0.843268
AFFX-PheX-M_at 72.9864 A 0.834139
AFFX-PheX-3_at 106.512 A 0.712257
AFFX-ThrX-5_at 23.4554 A 0.883887
AFFX-ThrX-M_at 169.343 A 0.455413

Total number of rows: 22283

Table truncated, full table size 668 Kbytes.




Supplementary file Size Download File type/resource
GSM225649.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM225649.EXP.gz 474 b (ftp)(http) EXP
Processed data included within Sample table

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