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Sample GSM225651 Query DataSets for GSM225651
Status Public on Sep 01, 2007
Title D01 6h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2218.75 P 0.00110197
AFFX-BioB-M_at 5196.23 P 6.02111e-05
AFFX-BioB-3_at 2179.95 P 0.000340305
AFFX-BioC-5_at 7874.99 P 8.14279e-05
AFFX-BioC-3_at 5545.71 P 4.42873e-05
AFFX-BioDn-5_at 7227.03 P 4.42873e-05
AFFX-BioDn-3_at 35538.3 P 8.14279e-05
AFFX-CreX-5_at 47648 P 4.42873e-05
AFFX-CreX-3_at 66411.3 P 4.42873e-05
AFFX-DapX-5_at 46.7595 A 0.544587
AFFX-DapX-M_at 188.542 A 0.313723
AFFX-DapX-3_at 51.2633 A 0.9273
AFFX-LysX-5_at 20.0944 A 0.659339
AFFX-LysX-M_at 85.0908 A 0.749204
AFFX-LysX-3_at 36.094 A 0.51489
AFFX-PheX-5_at 8.11363 A 0.99156
AFFX-PheX-M_at 33.2299 A 0.824672
AFFX-PheX-3_at 122.099 A 0.737173
AFFX-ThrX-5_at 131.819 A 0.631562
AFFX-ThrX-M_at 113.082 A 0.574038

Total number of rows: 22283

Table truncated, full table size 668 Kbytes.




Supplementary file Size Download File type/resource
GSM225651.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225651.EXP.gz 470 b (ftp)(http) EXP
Processed data included within Sample table

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