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Sample GSM225653 Query DataSets for GSM225653
Status Public on Sep 01, 2007
Title D07 0h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1458.91 P 0.036569
AFFX-BioB-M_at 1941.39 P 0.000662269
AFFX-BioB-3_at 1031.25 P 0.036569
AFFX-BioC-5_at 4035.01 P 0.000126798
AFFX-BioC-3_at 3049.12 P 0.000224668
AFFX-BioDn-5_at 4367.93 P 0.000146581
AFFX-BioDn-3_at 27203.5 P 0.00010954
AFFX-CreX-5_at 37300.9 P 4.42873e-05
AFFX-CreX-3_at 58773.2 P 4.42873e-05
AFFX-DapX-5_at 113.032 A 0.41138
AFFX-DapX-M_at 299.66 A 0.287743
AFFX-DapX-3_at 81.603 A 0.559354
AFFX-LysX-5_at 29.2975 A 0.868639
AFFX-LysX-M_at 221.077 A 0.5
AFFX-LysX-3_at 236.941 A 0.313723
AFFX-PheX-5_at 10.9497 A 0.998204
AFFX-PheX-M_at 12.4256 A 0.98333
AFFX-PheX-3_at 92.1305 A 0.58862
AFFX-ThrX-5_at 38.2836 A 0.937071
AFFX-ThrX-M_at 22.8357 A 0.843268

Total number of rows: 22283

Table truncated, full table size 666 Kbytes.




Supplementary file Size Download File type/resource
GSM225653.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225653.EXP.gz 457 b (ftp)(http) EXP
Processed data included within Sample table

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