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Sample GSM225654 Query DataSets for GSM225654
Status Public on Sep 01, 2007
Title D07 12h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1190.94 P 0.00255552
AFFX-BioB-M_at 1941.73 P 7.00668e-05
AFFX-BioB-3_at 1089.41 P 0.000753643
AFFX-BioC-5_at 3737.99 P 0.000126798
AFFX-BioC-3_at 3330.32 P 8.14279e-05
AFFX-BioDn-5_at 4610.32 P 5.16732e-05
AFFX-BioDn-3_at 26430.2 P 7.00668e-05
AFFX-CreX-5_at 40275.4 P 4.42873e-05
AFFX-CreX-3_at 61249.1 P 4.42873e-05
AFFX-DapX-5_at 10.3279 A 0.814869
AFFX-DapX-M_at 203.401 M 0.0542134
AFFX-DapX-3_at 29.9065 A 0.910522
AFFX-LysX-5_at 17.3763 A 0.824672
AFFX-LysX-M_at 69.3195 A 0.58862
AFFX-LysX-3_at 160.379 A 0.139482
AFFX-PheX-5_at 14.3985 A 0.979978
AFFX-PheX-M_at 15.2225 A 0.971543
AFFX-PheX-3_at 132.55 A 0.455413
AFFX-ThrX-5_at 14.274 A 0.794268
AFFX-ThrX-M_at 74.642 A 0.58862

Total number of rows: 22283

Table truncated, full table size 670 Kbytes.




Supplementary file Size Download File type/resource
GSM225654.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225654.EXP.gz 460 b (ftp)(http) EXP
Processed data included within Sample table

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