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Sample GSM225657 Query DataSets for GSM225657
Status Public on Sep 01, 2007
Title D07 6h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1355.11 P 0.00110197
AFFX-BioB-M_at 2592.22 P 0.00010954
AFFX-BioB-3_at 1185.75 P 0.00159257
AFFX-BioC-5_at 4183.39 P 8.14279e-05
AFFX-BioC-3_at 3309.56 P 4.42873e-05
AFFX-BioDn-5_at 5435.25 P 4.42873e-05
AFFX-BioDn-3_at 27380.8 P 7.00668e-05
AFFX-CreX-5_at 40252.2 P 4.42873e-05
AFFX-CreX-3_at 63358.3 P 4.42873e-05
AFFX-DapX-5_at 166.748 A 0.0894781
AFFX-DapX-M_at 99.2644 A 0.544587
AFFX-DapX-3_at 16.6092 A 0.966323
AFFX-LysX-5_at 53.4762 A 0.672921
AFFX-LysX-M_at 96.6606 A 0.544587
AFFX-LysX-3_at 104.793 A 0.175328
AFFX-PheX-5_at 14.8503 A 0.953518
AFFX-PheX-M_at 17.1611 A 0.897835
AFFX-PheX-3_at 240.35 A 0.300606
AFFX-ThrX-5_at 12.7182 A 0.852061
AFFX-ThrX-M_at 131.965 A 0.544587

Total number of rows: 22283

Table truncated, full table size 673 Kbytes.




Supplementary file Size Download File type/resource
GSM225657.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225657.EXP.gz 464 b (ftp)(http) EXP
Processed data included within Sample table

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