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Sample GSM225659 Query DataSets for GSM225659
Status Public on Sep 01, 2007
Title D09 12h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1349.72 P 0.00227496
AFFX-BioB-M_at 2341.62 P 0.000195116
AFFX-BioB-3_at 1333.53 P 0.00762003
AFFX-BioC-5_at 5045.76 P 8.14279e-05
AFFX-BioC-3_at 4061.87 P 7.00668e-05
AFFX-BioDn-5_at 4378.41 P 6.02111e-05
AFFX-BioDn-3_at 28599.1 P 8.14279e-05
AFFX-CreX-5_at 47046.3 P 4.42873e-05
AFFX-CreX-3_at 70769.8 P 4.42873e-05
AFFX-DapX-5_at 113.027 A 0.58862
AFFX-DapX-M_at 171.041 A 0.48511
AFFX-DapX-3_at 33.8539 A 0.987453
AFFX-LysX-5_at 138.546 P 0.0429619
AFFX-LysX-M_at 377.029 A 0.354453
AFFX-LysX-3_at 141.183 A 0.411373
AFFX-PheX-5_at 22.0772 A 0.932322
AFFX-PheX-M_at 29.8771 A 0.904333
AFFX-PheX-3_at 308.425 A 0.39692
AFFX-ThrX-5_at 52.8392 A 0.814869
AFFX-ThrX-M_at 39.555 A 0.883887

Total number of rows: 22283

Table truncated, full table size 668 Kbytes.




Supplementary file Size Download File type/resource
GSM225659.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225659.EXP.gz 472 b (ftp)(http) EXP
Processed data included within Sample table

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