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Sample GSM225663 Query DataSets for GSM225663
Status Public on Sep 01, 2007
Title D09 24h Media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Primary human peripherial monocytes
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human monocytes with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1224.83 P 0.00179591
AFFX-BioB-M_at 3084.06 P 0.000258358
AFFX-BioB-3_at 1291.53 P 0.00687065
AFFX-BioC-5_at 4500.31 P 9.4506e-05
AFFX-BioC-3_at 3315.42 P 6.02111e-05
AFFX-BioDn-5_at 4227.21 P 7.00668e-05
AFFX-BioDn-3_at 26022 P 0.00010954
AFFX-CreX-5_at 41845.2 P 4.42873e-05
AFFX-CreX-3_at 58339.8 P 4.42873e-05
AFFX-DapX-5_at 146.938 A 0.165861
AFFX-DapX-M_at 156.72 A 0.39692
AFFX-DapX-3_at 22.7052 A 0.843268
AFFX-LysX-5_at 100.634 A 0.783476
AFFX-LysX-M_at 163.257 A 0.354453
AFFX-LysX-3_at 172.8 A 0.275146
AFFX-PheX-5_at 10.8053 A 0.973889
AFFX-PheX-M_at 26.7966 A 0.860518
AFFX-PheX-3_at 316.422 A 0.382599
AFFX-ThrX-5_at 23.2389 A 0.876428
AFFX-ThrX-M_at 41.6417 A 0.783476

Total number of rows: 22283

Table truncated, full table size 671 Kbytes.




Supplementary file Size Download File type/resource
GSM225663.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225663.EXP.gz 470 b (ftp)(http) EXP
Processed data included within Sample table

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