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Sample GSM225860 Query DataSets for GSM225860
Status Public on Sep 01, 2007
Title D12 12h media
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Human dendritic cells derived with GM-CSF and IL-4
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human dendritic cells with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 29, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 8676.45 P 0.000296708
AFFX-BioB-M_at 24219.1 P 7.00668e-05
AFFX-BioB-3_at 11880.2 P 4.42873e-05
AFFX-BioC-5_at 26563.7 P 6.02111e-05
AFFX-BioC-3_at 21741.4 P 5.16732e-05
AFFX-BioDn-5_at 27148.6 P 5.16732e-05
AFFX-BioDn-3_at 132222 P 5.16732e-05
AFFX-CreX-5_at 161244 P 4.42873e-05
AFFX-CreX-3_at 243771 P 4.42873e-05
AFFX-DapX-5_at 423.853 A 0.275146
AFFX-DapX-M_at 76.194 A 0.916408
AFFX-DapX-3_at 66.8137 A 0.9273
AFFX-LysX-5_at 262.21 A 0.617401
AFFX-LysX-M_at 425.22 A 0.440646
AFFX-LysX-3_at 72.6806 A 0.852061
AFFX-PheX-5_at 34.4128 A 0.9273
AFFX-PheX-M_at 55.2008 A 0.883887
AFFX-PheX-3_at 142.988 A 0.852061
AFFX-ThrX-5_at 88.5733 A 0.794268
AFFX-ThrX-M_at 33.4513 A 0.963431

Total number of rows: 22283

Table truncated, full table size 663 Kbytes.




Supplementary file Size Download File type/resource
GSM225860.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM225860.EXP.gz 457 b (ftp)(http) EXP
Processed data included within Sample table

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