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Sample GSM225887 Query DataSets for GSM225887
Status Public on Sep 01, 2007
Title D15 12h TLR2/1L
Sample type RNA
 
Source name Total RNA
Organism Homo sapiens
Characteristics Human dendritic cells derived with GM-CSF and IL-4
Extracted molecule total RNA
Extraction protocol Trizol total RNA extraction based on manufacturer's protocol.
RNA cleanup with RNeasy kit based on manufacturer's protocol.
Label Biotin
Label protocol UCLA Microarray Core Facility
 
Hybridization protocol UCLA Microarray Core Facility
Scan protocol UCLA Microarray Core Facility
Description Timecourse of TLR2/1 stimulated human dendritic cells with the Mycobacterium tuberculosis derived 19kDa lipopeptide.
Data processing UCLA Microarray Core Facility
 
Submission date Aug 30, 2007
Last update date Sep 01, 2016
Contact name Philip T. Liu
E-mail(s) philip@bruinphd.com
Phone 310-825-6910
Fax 310-267-2121
Organization name University of California at Los Angeles
Department Department of Medicine, Divison of Dermatology
Lab Modlin
Street address 611 Charles E Young Dr. East, 522 MBI
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platform ID GPL96
Series (1)
GSE8921 Toll-like receptor triggering of a vitamin D-mediated human antimicrobial response
Relations
Reanalyzed by GSE86363

Data table header descriptions
ID_REF
VALUE Raw Detection Value
ABS_CALL Absent Call
DETECTION P-VALUE P value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1244.39 P 0.00762003
AFFX-BioB-M_at 2855.74 P 6.02111e-05
AFFX-BioB-3_at 1019.09 P 0.000296708
AFFX-BioC-5_at 3283.6 P 0.000146581
AFFX-BioC-3_at 2516.2 P 7.00668e-05
AFFX-BioDn-5_at 3580.35 P 4.42873e-05
AFFX-BioDn-3_at 22259.4 P 0.000169227
AFFX-CreX-5_at 29163.3 P 4.42873e-05
AFFX-CreX-3_at 45615.3 P 4.42873e-05
AFFX-DapX-5_at 37.5774 A 0.354453
AFFX-DapX-M_at 123.553 A 0.313723
AFFX-DapX-3_at 35.1322 A 0.910522
AFFX-LysX-5_at 41.6486 A 0.659339
AFFX-LysX-M_at 219.027 A 0.39692
AFFX-LysX-3_at 76.7535 A 0.48511
AFFX-PheX-5_at 8.73636 A 0.953518
AFFX-PheX-M_at 12.2004 A 0.937071
AFFX-PheX-3_at 54.3577 A 0.772364
AFFX-ThrX-5_at 33.7504 A 0.824672
AFFX-ThrX-M_at 86.4496 A 0.440646

Total number of rows: 22283

Table truncated, full table size 671 Kbytes.




Supplementary file Size Download File type/resource
GSM225887.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM225887.EXP.gz 475 b (ftp)(http) EXP
Processed data included within Sample table

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