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Sample GSM226823 Query DataSets for GSM226823
Status Public on Dec 12, 2007
Title Mouse Aorta, Control_for_Rosiglitazone_A
Sample type RNA
Source name Aorta from control mice
Organism Mus musculus
Characteristics Mouse: strain C57
Treatment protocol Mouse chow, vehicle for rosiglitazone.
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
Hybridization protocol Standard Affymetrix protocol.
Scan protocol Standard Affymetrix protocol.
Description Gene expression data from blood vessel.
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
Submission date Sep 04, 2007
Last update date Aug 28, 2018
Contact name Henry Keen
Phone 319-335-8926
Organization name University of Iowa
Department Pharmacology
Lab Dr. Curt D. Sigmund's Laboratory
Street address 2-370 BSB
City Iowa City
State/province IA
ZIP/Postal code 52242
Country USA
Platform ID GPL1261
Series (1)
GSE8949 Gene expression changes in mouse aorta during activation of or interference with PPAR gamma signaling.
Reanalyzed by GSE119085

Data table header descriptions
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
AFFX-BioB-5_at 1437.4 P
AFFX-BioB-M_at 2493.8 P
AFFX-BioB-3_at 1895.6 P
AFFX-BioC-5_at 4313.9 P
AFFX-BioC-3_at 5142.8 P
AFFX-BioDn-5_at 10464.1 P
AFFX-BioDn-3_at 18508.9 P
AFFX-CreX-5_at 65741.2 P
AFFX-CreX-3_at 74612.5 P
AFFX-DapX-5_at 3175.6 P
AFFX-DapX-M_at 6343.7 P
AFFX-DapX-3_at 7389.7 P
AFFX-LysX-5_at 495 P
AFFX-LysX-M_at 858.8 P
AFFX-LysX-3_at 1894.6 P
AFFX-PheX-5_at 636.7 P
AFFX-PheX-M_at 740.6 P
AFFX-PheX-3_at 980 P
AFFX-ThrX-5_at 721.4 P
AFFX-ThrX-M_at 1002.4 P

Total number of rows: 45101

Table truncated, full table size 849 Kbytes.

Supplementary file Size Download File type/resource
GSM226823.CEL.gz 3.5 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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