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Sample GSM226951 Query DataSets for GSM226951
Status Public on Sep 01, 2008
Title Mouse immune cells 1 hr after treatment (mcw054)
Sample type RNA
 
Source name mouse immune cells 1 hr
Organism Mus musculus
Characteristics BL6 NOD2 -/-
Extracted molecule total RNA
Extraction protocol See manuscript
Label Standard Affymetrix label
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description See manuscript
Data processing MAS 5.0 as implemented in GCOS
 
Submission date Sep 05, 2007
Last update date Aug 28, 2018
Contact name David Finkelstein
E-mail(s) david.finkelstein@stjude.org
Phone 9014953931
Organization name St Jude Children's Research Hospital
Department Computational Biology
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL1261
Series (1)
GSE8960 The TLR2/NOD2/RICK signaling axis regulates stimulus-specific IL-10 production
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Present vs Absent
DETECTION P-VALUE Probability that detected signal is noise

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1068.54 P 8.14279e-05
AFFX-BioB-M_at 1626.13 P 4.42873e-05
AFFX-BioB-3_at 1069.83 P 4.42873e-05
AFFX-BioC-5_at 3001.63 P 5.16732e-05
AFFX-BioC-3_at 3780.18 P 4.42873e-05
AFFX-BioDn-5_at 8207.15 P 4.42873e-05
AFFX-BioDn-3_at 11716.7 P 4.42873e-05
AFFX-CreX-5_at 35147.1 P 5.16732e-05
AFFX-CreX-3_at 39906.6 P 4.42873e-05
AFFX-DapX-5_at 1414.42 P 4.42873e-05
AFFX-DapX-M_at 2594.35 P 0.00010954
AFFX-DapX-3_at 3055.34 P 5.16732e-05
AFFX-LysX-5_at 157.169 P 7.00668e-05
AFFX-LysX-M_at 231.685 P 0.00159257
AFFX-LysX-3_at 479.49 P 4.42873e-05
AFFX-PheX-5_at 215.106 P 0.000126798
AFFX-PheX-M_at 294.921 P 8.14279e-05
AFFX-PheX-3_at 324.515 P 6.02111e-05
AFFX-ThrX-5_at 385.632 P 0.000126798
AFFX-ThrX-M_at 499.982 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1378 Kbytes.




Supplementary file Size Download File type/resource
GSM226951.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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