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Sample GSM226965 Query DataSets for GSM226965
Status Public on Sep 01, 2008
Title Mouse immune cells time 4 hrs after treatment (mcw022)
Sample type RNA
 
Source name mouse immune cells time 4 hrs after treatment
Organism Mus musculus
Characteristics BL6 NOD2-/-
Extracted molecule total RNA
Extraction protocol See manuscript
Label Standard Affymetrix label
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description See manuscript
Data processing MAS 5.0 as implemented in GCOS
 
Submission date Sep 05, 2007
Last update date Aug 28, 2018
Contact name David Finkelstein
E-mail(s) david.finkelstein@stjude.org
Phone 9014953931
Organization name St Jude Children's Research Hospital
Department Computational Biology
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL1261
Series (1)
GSE8960 The TLR2/NOD2/RICK signaling axis regulates stimulus-specific IL-10 production
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Absent vs Present
DETECTION P-VALUE Probability that signal is noise

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 752.685 P 0.000509415
AFFX-BioB-M_at 1117.3 P 4.42873e-05
AFFX-BioB-3_at 736.105 P 6.02111e-05
AFFX-BioC-5_at 2196.48 P 7.00668e-05
AFFX-BioC-3_at 2465.92 P 4.42873e-05
AFFX-BioDn-5_at 4866.29 P 4.42873e-05
AFFX-BioDn-3_at 7632.25 P 4.42873e-05
AFFX-CreX-5_at 27529 P 5.16732e-05
AFFX-CreX-3_at 31854.5 P 4.42873e-05
AFFX-DapX-5_at 692.579 P 0.00010954
AFFX-DapX-M_at 1183 P 0.000581214
AFFX-DapX-3_at 1285.08 P 5.16732e-05
AFFX-LysX-5_at 69.3904 P 0.0125468
AFFX-LysX-M_at 128.418 P 0.026111
AFFX-LysX-3_at 285.489 P 8.12137e-05
AFFX-PheX-5_at 158.865 P 0.0012475
AFFX-PheX-M_at 148.243 P 0.00159257
AFFX-PheX-3_at 150.073 P 0.000509415
AFFX-ThrX-5_at 149.618 P 0.000662269
AFFX-ThrX-M_at 176.765 P 0.000224668

Total number of rows: 45101

Table truncated, full table size 1376 Kbytes.




Supplementary file Size Download File type/resource
GSM226965.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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