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Sample GSM226970 Query DataSets for GSM226970
Status Public on Sep 01, 2008
Title Mouse immune cells time zero control (mcw012)
Sample type RNA
 
Source name mouse immune cells time zero (control)
Organism Mus musculus
Characteristics BL6 Wild type
Extracted molecule total RNA
Extraction protocol See manuscript
Label Standard Affymetrix label
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description See manuscript
Data processing MAS 5.0 as implemented in GCOS
 
Submission date Sep 05, 2007
Last update date Aug 28, 2018
Contact name David Finkelstein
E-mail(s) david.finkelstein@stjude.org
Phone 9014953931
Organization name St Jude Children's Research Hospital
Department Computational Biology
Street address 332 N. Lauderdale St.
City Memphis
State/province TN
ZIP/Postal code 38105
Country USA
 
Platform ID GPL1261
Series (1)
GSE8960 The TLR2/NOD2/RICK signaling axis regulates stimulus-specific IL-10 production
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL Absent vs Present
DETECTION P-VALUE Probability that signal is noise

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 947.147 P 0.000258358
AFFX-BioB-M_at 1749.79 P 4.42873e-05
AFFX-BioB-3_at 1066.32 P 4.42873e-05
AFFX-BioC-5_at 2715.08 P 6.02111e-05
AFFX-BioC-3_at 3223.71 P 4.42873e-05
AFFX-BioDn-5_at 6893.41 P 4.42873e-05
AFFX-BioDn-3_at 9638.14 P 4.42873e-05
AFFX-CreX-5_at 35471.2 P 5.16732e-05
AFFX-CreX-3_at 40833.5 P 4.42873e-05
AFFX-DapX-5_at 1076.88 P 5.16732e-05
AFFX-DapX-M_at 1763.64 P 0.000258358
AFFX-DapX-3_at 1847.38 P 5.16732e-05
AFFX-LysX-5_at 93.6208 P 0.000971263
AFFX-LysX-M_at 148.165 P 0.00401172
AFFX-LysX-3_at 417.326 P 0.000126798
AFFX-PheX-5_at 190.918 P 0.000146402
AFFX-PheX-M_at 282.011 P 0.0020226
AFFX-PheX-3_at 245.471 P 4.42873e-05
AFFX-ThrX-5_at 262.402 P 0.000753643
AFFX-ThrX-M_at 316.4 P 8.14279e-05

Total number of rows: 45101

Table truncated, full table size 1377 Kbytes.




Supplementary file Size Download File type/resource
GSM226970.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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