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Sample GSM229439 Query DataSets for GSM229439
Status Public on Apr 01, 2011
Title HdhQ111/HdhQ111 striatum at 3~10 weeks biological rep 5
Sample type RNA
Source name HdhQ111/HdhQ111 striatum at 3~10 weeks biological rep 5
Organism Mus musculus
Characteristics hdh genotype: Q111/Q111
tissue: striatum
age: 3~10 weeks
Extracted molecule total RNA
Extraction protocol Trizol extraction and Qiagen mini coulmn clean-up
Label biotin
Label protocol Affymetrix protocol
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description HdhQ111/HdhQ111 striatum at 3~10 weeks
Data processing gcRMA log2 scale
Submission date Sep 13, 2007
Last update date Aug 14, 2011
Contact name Jong-Min Lee
Phone 617-726-5726
Organization name Massachusetts General Hospital
Department Center for Human Genetic Reseaarch
Street address 185 Cambridge Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
Platform ID GPL1261
Series (2)
GSE9038 Gene expression profiles of striatum and cerebellum from knock-in mouse model of Huntington's disease
GSE19780 A novel approach to investigate tissue-specific trinucleotide repeat instability

Data table header descriptions
ID_REF MG 430 2.0 probe ID
VALUE gcRMA log2 scale

Data table
1415670_at 10.1528
1415671_at 10.7976
1415672_at 10.7889
1415673_at 7.8341
1415674_a_at 8.8053
1415675_at 8.0365
1415676_a_at 10.6277
1415677_at 9.4512
1415678_at 9.7019
1415679_at 9.8025
1415680_at 7.7418
1415681_at 7.8353
1415682_at 8.0259
1415683_at 9.0911
1415684_at 7.1297
1415685_at 8.0466
1415686_at 10.5751
1415687_a_at 12.5092
1415688_at 9.9024
1415689_s_at 7.2113

Total number of rows: 45101

Table truncated, full table size 808 Kbytes.

Supplementary file Size Download File type/resource
GSM229439.CEL.gz 3.8 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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