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Sample GSM229440 Query DataSets for GSM229440
Status Public on Apr 01, 2011
Title HdhQ111/HdhQ111 striatum at 3~10 weeks biological rep 6
Sample type RNA
Source name HdhQ111/HdhQ111 striatum at 3~10 weeks biological rep 6
Organism Mus musculus
Characteristics hdh genotype: Q111/Q111
tissue: striatum
age: 3~10 weeks
Extracted molecule total RNA
Extraction protocol Trizol extraction and Qiagen mini coulmn clean-up
Label biotin
Label protocol Affymetrix protocol
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description HdhQ111/HdhQ111 striatum at 3~10 weeks
Data processing gcRMA log2 scale
Submission date Sep 13, 2007
Last update date Aug 14, 2011
Contact name Jong-Min Lee
Phone 617-726-5726
Organization name Massachusetts General Hospital
Department Center for Human Genetic Reseaarch
Street address 185 Cambridge Street
City Boston
State/province MA
ZIP/Postal code 02114
Country USA
Platform ID GPL1261
Series (2)
GSE9038 Gene expression profiles of striatum and cerebellum from knock-in mouse model of Huntington's disease
GSE19780 A novel approach to investigate tissue-specific trinucleotide repeat instability

Data table header descriptions
ID_REF MG 430 2.0 probe ID
VALUE gcRMA log2 scale

Data table
1415670_at 10.0571
1415671_at 10.5852
1415672_at 10.7635
1415673_at 7.5689
1415674_a_at 8.7442
1415675_at 7.9599
1415676_a_at 10.3867
1415677_at 9.4113
1415678_at 9.6891
1415679_at 9.7298
1415680_at 7.7487
1415681_at 7.7004
1415682_at 8.164
1415683_at 9.1566
1415684_at 7.1264
1415685_at 7.8625
1415686_at 10.6526
1415687_a_at 12.4356
1415688_at 9.8197
1415689_s_at 6.8354

Total number of rows: 45101

Table truncated, full table size 808 Kbytes.

Supplementary file Size Download File type/resource
GSM229440.CEL.gz 3.7 Mb (ftp)(http) CEL
Raw data provided as supplementary file
Processed data included within Sample table

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