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Sample GSM229793 Query DataSets for GSM229793
Status Public on Aug 24, 2011
Title Dap12-wt microglia 6
Sample type RNA
 
Source name mouse primary microglia
Organism Mus musculus
Characteristics C57BL6 wt
Extracted molecule total RNA
Extraction protocol Trizol and RNeasy
Label biotin
Label protocol Affymetrix two-cycle labelling kit
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description wt
Data processing GCOS scaling to target intensity of 100
 
Submission date Sep 14, 2007
Last update date Aug 24, 2011
Contact name Anna Kiialainen
E-mail(s) Anna.Kiialainen@medsci.uu.se
Phone +46186114951
Organization name Uppsala University
Department Deapartment of Medical Sciences
Street address University Hospital, Entrance 70
City Uppsala
ZIP/Postal code 75185
Country Sweden
 
Platform ID GPL1261
Series (2)
GSE9043 Dap12 microglia
GSE9083 Genome-wide expression analysis of Dap12 (Tyrobp)-deficient mouse brain and microglial cells

Data table header descriptions
ID_REF
VALUE expression value
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 124.688 P 0.000224668
AFFX-BioB-M_at 232.216 P 5.16732e-05
AFFX-BioB-3_at 138.884 P 4.42873e-05
AFFX-BioC-5_at 529.336 P 5.16732e-05
AFFX-BioC-3_at 508.095 P 4.42873e-05
AFFX-BioDn-5_at 936.277 P 4.42873e-05
AFFX-BioDn-3_at 1937.91 P 4.42873e-05
AFFX-CreX-5_at 5502.28 P 5.16732e-05
AFFX-CreX-3_at 6824.56 P 4.42873e-05
AFFX-DapX-5_at 12877.4 P 4.42873e-05
AFFX-DapX-M_at 11442.2 P 4.42873e-05
AFFX-DapX-3_at 10857.8 P 4.42873e-05
AFFX-LysX-5_at 10286.8 P 4.42873e-05
AFFX-LysX-M_at 11133.7 P 4.42873e-05
AFFX-LysX-3_at 12242 P 4.42873e-05
AFFX-PheX-5_at 10547.3 P 4.42873e-05
AFFX-PheX-M_at 12372.3 P 4.42873e-05
AFFX-PheX-3_at 11404.2 P 4.42873e-05
AFFX-ThrX-5_at 8442.56 P 4.42873e-05
AFFX-ThrX-M_at 12166.3 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1379 Kbytes.




Supplementary file Size Download File type/resource
GSM229793.CEL.gz 3.4 Mb (ftp)(http) CEL
GSM229793.CHP.gz 249.5 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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