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Sample GSM229794 Query DataSets for GSM229794
Status Public on Aug 24, 2011
Title Dap12-wt microglia 7_12
Sample type RNA
Source name mouse primary microglia
Organism Mus musculus
Characteristics C57BL6 wt
Extracted molecule total RNA
Extraction protocol Trizol and RNeasy
Label biotin
Label protocol Affymetrix two-cycle labelling kit
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description wt
Data processing GCOS scaling to target intensity of 100
Submission date Sep 14, 2007
Last update date Aug 24, 2011
Contact name Anna Kiialainen
Phone +46186114951
Organization name Uppsala University
Department Deapartment of Medical Sciences
Street address University Hospital, Entrance 70
City Uppsala
ZIP/Postal code 75185
Country Sweden
Platform ID GPL1261
Series (2)
GSE9043 Dap12 microglia
GSE9083 Genome-wide expression analysis of Dap12 (Tyrobp)-deficient mouse brain and microglial cells

Data table header descriptions
VALUE expression value
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix detection p-value

Data table
AFFX-BioB-5_at 100.509 P 0.000224668
AFFX-BioB-M_at 187.299 P 4.42873e-05
AFFX-BioB-3_at 118.916 P 4.42873e-05
AFFX-BioC-5_at 384.154 P 5.16732e-05
AFFX-BioC-3_at 419.883 P 4.42873e-05
AFFX-BioDn-5_at 761.651 P 4.42873e-05
AFFX-BioDn-3_at 1543.48 P 4.42873e-05
AFFX-CreX-5_at 4576.24 P 5.16732e-05
AFFX-CreX-3_at 5374.58 P 4.42873e-05
AFFX-DapX-5_at 6106.91 P 4.42873e-05
AFFX-DapX-M_at 7354.87 P 4.42873e-05
AFFX-DapX-3_at 7851.14 P 4.42873e-05
AFFX-LysX-5_at 4652.06 P 4.42873e-05
AFFX-LysX-M_at 7299.72 P 4.42873e-05
AFFX-LysX-3_at 7703.4 P 4.42873e-05
AFFX-PheX-5_at 6398.42 P 4.42873e-05
AFFX-PheX-M_at 7956.56 P 4.42873e-05
AFFX-PheX-3_at 7357.62 P 4.42873e-05
AFFX-ThrX-5_at 2017.46 P 4.42873e-05
AFFX-ThrX-M_at 6522.08 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1385 Kbytes.

Supplementary file Size Download File type/resource
GSM229794.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM229794.CHP.gz 249.0 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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