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Sample GSM229796 Query DataSets for GSM229796
Status Public on Aug 24, 2011
Title Dap12-ko microglia 10
Sample type RNA
 
Source name mouse primary microglia
Organism Mus musculus
Characteristics C57BL6 Dap12-deficient
Extracted molecule total RNA
Extraction protocol Trizol and RNeasy
Label biotin
Label protocol Affymetrix two-cycle kit
 
Hybridization protocol Affymetrix standard protocol
Scan protocol Affymetrix standard protocol
Description Dap12-ko
Data processing GCOS scaling to target intensity 100
 
Submission date Sep 14, 2007
Last update date Aug 24, 2011
Contact name Anna Kiialainen
E-mail(s) Anna.Kiialainen@medsci.uu.se
Phone +46186114951
Organization name Uppsala University
Department Deapartment of Medical Sciences
Street address University Hospital, Entrance 70
City Uppsala
ZIP/Postal code 75185
Country Sweden
 
Platform ID GPL1261
Series (2)
GSE9043 Dap12 microglia
GSE9083 Genome-wide expression analysis of Dap12 (Tyrobp)-deficient mouse brain and microglial cells

Data table header descriptions
ID_REF
VALUE expression value
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 84.9919 P 0.000856509
AFFX-BioB-M_at 135.654 P 7.00668e-05
AFFX-BioB-3_at 74.0726 P 7.00668e-05
AFFX-BioC-5_at 253.5 P 6.02111e-05
AFFX-BioC-3_at 366.648 P 4.42873e-05
AFFX-BioDn-5_at 647.737 P 4.42873e-05
AFFX-BioDn-3_at 1222.73 P 4.42873e-05
AFFX-CreX-5_at 3209.84 P 5.16732e-05
AFFX-CreX-3_at 3976.9 P 4.42873e-05
AFFX-DapX-5_at 6345.05 P 4.42873e-05
AFFX-DapX-M_at 6329.77 P 4.42873e-05
AFFX-DapX-3_at 5884.12 P 4.42873e-05
AFFX-LysX-5_at 4657.6 P 4.42873e-05
AFFX-LysX-M_at 6287.12 P 4.42873e-05
AFFX-LysX-3_at 6558.87 P 4.42873e-05
AFFX-PheX-5_at 5715.18 P 4.42873e-05
AFFX-PheX-M_at 6960.32 P 4.42873e-05
AFFX-PheX-3_at 6226.32 P 4.42873e-05
AFFX-ThrX-5_at 4419 P 4.42873e-05
AFFX-ThrX-M_at 6627.59 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1382 Kbytes.




Supplementary file Size Download File type/resource
GSM229796.CEL.gz 3.8 Mb (ftp)(http) CEL
GSM229796.CHP.gz 246.1 Kb (ftp)(http) CHP
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file

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