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GEO accession:
Sample GSM229796
Query DataSets for GSM229796
Status
Public on Aug 24, 2011
Title
Dap12-ko microglia 10
Sample type
RNA
Source name
mouse primary microglia
Organism
Mus musculus
Characteristics
C57BL6 Dap12-deficient
Extracted molecule
total RNA
Extraction protocol
Trizol and RNeasy
Label
biotin
Label protocol
Affymetrix two-cycle kit
Hybridization protocol
Affymetrix standard protocol
Scan protocol
Affymetrix standard protocol
Description
Dap12-ko
Data processing
GCOS scaling to target intensity 100
Submission date
Sep 14, 2007
Last update date
Aug 24, 2011
Contact name
Anna Kiialainen
E-mail(s)
Anna.Kiialainen@medsci.uu.se
Phone
+46186114951
Organization name
Uppsala University
Department
Deapartment of Medical Sciences
Street address
University Hospital, Entrance 70
City
Uppsala
ZIP/Postal code
75185
Country
Sweden
Platform ID
GPL1261
Series (2)
GSE9043
Dap12 microglia
GSE9083
Genome-wide expression analysis of Dap12 (Tyrobp)-deficient mouse brain and microglial cells
Data table header descriptions
ID_REF
VALUE
expression value
ABS_CALL
Affymetrix detection call
DETECTION P-VALUE
Affymetrix detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
84.9919
P
0.000856509
AFFX-BioB-M_at
135.654
P
7.00668e-05
AFFX-BioB-3_at
74.0726
P
7.00668e-05
AFFX-BioC-5_at
253.5
P
6.02111e-05
AFFX-BioC-3_at
366.648
P
4.42873e-05
AFFX-BioDn-5_at
647.737
P
4.42873e-05
AFFX-BioDn-3_at
1222.73
P
4.42873e-05
AFFX-CreX-5_at
3209.84
P
5.16732e-05
AFFX-CreX-3_at
3976.9
P
4.42873e-05
AFFX-DapX-5_at
6345.05
P
4.42873e-05
AFFX-DapX-M_at
6329.77
P
4.42873e-05
AFFX-DapX-3_at
5884.12
P
4.42873e-05
AFFX-LysX-5_at
4657.6
P
4.42873e-05
AFFX-LysX-M_at
6287.12
P
4.42873e-05
AFFX-LysX-3_at
6558.87
P
4.42873e-05
AFFX-PheX-5_at
5715.18
P
4.42873e-05
AFFX-PheX-M_at
6960.32
P
4.42873e-05
AFFX-PheX-3_at
6226.32
P
4.42873e-05
AFFX-ThrX-5_at
4419
P
4.42873e-05
AFFX-ThrX-M_at
6627.59
P
4.42873e-05
Total number of rows:
45101
Table truncated, full table size
1382 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM229796.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
GSM229796.CHP.gz
246.1 Kb
(ftp)
(http)
CHP
Processed data included within Sample table
Processed data provided as supplementary file
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