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Sample GSM2299770 Query DataSets for GSM2299770
Status Public on Dec 08, 2016
Title Cortex from non diabetic BKS db/m mouse 1
Sample type RNA
 
Source name Cortex from nondiabetic littermate control mouse
Organism Mus musculus
Characteristics tissue: Cortex
disease state: non-diabetic
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using RNeasy Mini Kit (Qiagen, Hilden, Germany)
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from total RNA (Expression Analysis Technical Manual, Affymetrix).
 
Hybridization protocol Standard Affymetrix Protocol
Scan protocol GeneChip arrays were scanned by GeneChip Scanner 3000 7G according to the Affymetrix Expression Analysis Technical Manual.
Description Gene expression data from nondiabetic db/m Cortex (24 weeks old)
Data processing The data were analyzed using RMA method and Mouse Entrez Gene custom CDF annotation version 10 was used for the normalization
 
Submission date Aug 31, 2016
Last update date Dec 08, 2016
Contact name Viji Nair
E-mail(s) vijin@med.umich.edu
Organization name University of Michigan
Street address 1152 West Medical Centre Dr.
City Ann Arbor
ZIP/Postal code 48331
Country USA
 
Platform ID GPL7546
Series (1)
GSE86300 Tissue-specific metabolic reprogramming drives nutrient flux in diabetic complications

Data table header descriptions
ID_REF
VALUE Entrez Gene IDs and Log base 2 expression values are provided

Data table
ID_REF VALUE
11287_at 11.79574894
11298_at 5.246689539
11302_at 5.857125224
11303_at 5.376562336
11304_at 8.49288395
11305_at 8.078472857
11307_at 8.580262033
11308_at 10.73375731
11350_at 8.30471707
11352_at 8.696850332
11354_at 5.773891891
11363_at 13.35036122
11364_at 13.70115953
11370_at 13.27154304
11409_at 12.54298684
11416_at 11.84837081
11418_at 5.997559958
11419_at 4.890201435
11421_at 11.58012664
11423_at 6.587653123

Total number of rows: 16539

Table truncated, full table size 343 Kbytes.




Supplementary file Size Download File type/resource
GSM2299770_ctx_dbm_1.CEL.gz 3.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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