|
| Status |
Public on Nov 01, 2007 |
| Title |
Hep2 |
| Sample type |
RNA |
| |
|
| Source name |
Male mouse infected with H. hepaticus; and with dysplasia
|
| Organism |
Mus musculus |
| Characteristics |
male mouse infected
liver from infected male mouse
|
| Treatment protocol |
H. hepaticus inoculated male mouse
|
| Growth protocol |
male mice 20 months old
|
| Extracted molecule |
total RNA |
| Extraction protocol |
qiagen RNA extraction
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
Following fragmentation, cRNA was hybridized on Mouse genome 430 2.0 arrays
|
| Scan protocol |
GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
|
| Description |
Gene expression data from H. hepaticus infected mouse; mouse liver to study H. hepaticus infection and liver cancer
|
| Data processing |
The data were analyzed with Robust multichip analysis in RMA express
|
| |
|
| Submission date |
Sep 19, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Rebecca Catherine Fry |
| E-mail(s) |
rfry@unc.edu
|
| Organization name |
UNC-Chapel Hill
|
| Department |
Environmental Sciences and Engineering
|
| Street address |
1213 MHRC
|
| City |
Chapel Hill |
| ZIP/Postal code |
27599 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE9097 |
H. hepaticus infection and liver cancer |
|
| Relations |
| Reanalyzed by |
GSE119085 |
