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GEO accession:
Sample GSM23393
Query DataSets for GSM23393
Status
Public on Nov 19, 2004
Title
PMAthp-1
Sample type
SAGE
Anchor
NlaIII
Tag Count
3230
Tag Length
10
Source name
Cultured THP-1 cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Cultured THP-1 cells were stimulated with PMA for 8 days by which time they had differentiated into a macrophage-like phenotype
Submission date
May 19, 2004
Last update date
May 27, 2005
Contact name
J Max Wilkinson
E-mail(s)
jmaxwilk@rfc.ucl.ac.uk
Phone
+44 (0)207 830 2475
Fax
+44 (0)207 830 2475
Organization name
Royal Free & University College London School of Medicine
Department
Medicine
Lab
Centre For Nephrology
Street address
Rowland Hill Street
City
London
State/province
UK
ZIP/Postal code
NW3 2PF
Country
United Kingdom
Platform ID
GPL4
Series (1)
GSE1439
Differentiation of cultured THP-1 cells
Data table header descriptions
TAG
10bp SAGE TAG
COUNT
Absolute tag count
TPM
Tag frequency per million
Data table
TAG
COUNT
TPM
TGCCAAGGGT
41
12693
ATAATACATA
37
11455
TTATCAAGTG
33
10217
AGGCAGACAG
26
8050
TTATATAGTG
21
6502
CCCTGGGTTC
21
6502
ATGTCTCAAA
20
6192
GAGCGTTTTG
16
4954
TGTGTTGAGA
16
4954
AAAAAGTACC
15
4644
AAGGTGGAAG
15
4644
CAAGGTGACA
14
4334
GATTCCGTGA
13
4025
CACAAACGGT
13
4025
GGGTTTTTAT
12
3715
GTGTTAACCA
11
3406
CTAATAAAGC
11
3406
GTGAAACTAA
11
3406
CGCCGCCGGC
11
3406
TGGTGTTGAG
11
3406
Total number of rows:
2023
Table truncated, full table size
33 Kbytes
.
Supplementary data files not provided
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