NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM234772 Query DataSets for GSM234772
Status Public on Dec 31, 2008
Title Mouse_WT_ES_clone 1
Sample type RNA
 
Source name Mouse_WT_ES_clone 1
Organism Mus musculus
Characteristics Mouse_E14 ES cell_Undifferentialted
Growth protocol ES medium + 15% FBS +LIF
Extracted molecule total RNA
Extraction protocol RNeasy mini Kit
Label biotin
Label protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Hybridization protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Scan protocol Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Description Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
Data processing Affymetrix
GeneChip Expression Analysis
Technical manual
Rev 3
 
Submission date Oct 04, 2007
Last update date Aug 28, 2018
Contact name Kazuhiko Uchida
E-mail(s) kazuhiko.uchida@cbiri.org
Phone 81-29-861-3000
Fax 81-29-855-5271
Organization name University of Tsukuba
Department Institute of Basic Medical Sciences
Lab Molecular and biological Oncology
Street address 1-1-1 Tennnoudai
City Tsukuba
State/province Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL1261
Series (1)
GSE9244 WT vs Klf5 KO ES
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL detection call
DETECTION P-VALUE detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 119.881 P 0.000753643
AFFX-BioB-M_at 152.307 P 8.14279e-05
AFFX-BioB-3_at 97.8789 P 0.00010954
AFFX-BioC-5_at 350.21 P 5.16732e-05
AFFX-BioC-3_at 382.103 P 4.42873e-05
AFFX-BioDn-5_at 896.946 P 4.42873e-05
AFFX-BioDn-3_at 1302.91 P 7.00668e-05
AFFX-CreX-5_at 4415.41 P 5.16732e-05
AFFX-CreX-3_at 5630.97 P 4.42873e-05
AFFX-DapX-5_at 65.2691 P 0.000972149
AFFX-DapX-M_at 199.356 P 0.000753643
AFFX-DapX-3_at 296.683 P 0.000126798
AFFX-LysX-5_at 13.2511 P 0.0020226
AFFX-LysX-M_at 25.2446 P 0.0396608
AFFX-LysX-3_at 71.588 P 5.16732e-05
AFFX-PheX-5_at 12.2534 A 0.123572
AFFX-PheX-M_at 16.4721 P 0.0200219
AFFX-PheX-3_at 40.7636 P 7.00668e-05
AFFX-ThrX-5_at 16.9146 M 0.0629128
AFFX-ThrX-M_at 32.4157 P 0.00141043

Total number of rows: 45101

Table truncated, full table size 1386 Kbytes.




Supplementary file Size Download File type/resource
GSM234772.CEL.gz 3.7 Mb (ftp)(http) CEL
GSM234772.CHP.gz 245.1 Kb (ftp)(http) CHP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap