NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM234933 Query DataSets for GSM234933
Status Public on Oct 06, 2008
Title KNC_01
Sample type RNA
 
Source name skeletal muscle
Organism Bos taurus
Characteristics sample: ~2 years old Hanwoo (Korean native cattle) longissimus dorsi
Extracted molecule polyA RNA
Extraction protocol total RNA: Trizol reagent
poly A RNA: Qiagen oligotex resin
Label biotin
Label protocol Affymetrix protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Affymetrix protocol
Description GeneChip Bovine Genome Array
Data processing global scaling
 
Submission date Oct 07, 2007
Last update date Aug 14, 2011
Contact name Cheol-Koo Lee
E-mail(s) cklee2005@korea.ac.kr
Phone 82-2-3290-3008
Organization name Korea University
Department Biotechnology
Lab Functional Genomics
Street address Korea University, Biotechnology #318 West building, Anam-dong, Seongbuk-gu
City Seoul
ZIP/Postal code 136-701
Country South Korea
 
Platform ID GPL2112
Series (1)
GSE9256 Transcriptomes from Longissimus dorsi samples of Korean Native Cattle (Hanwoo)

Data table header descriptions
ID_REF
VALUE Value
ABS_CALL Absolute call
DETECTION P-VALUE Detection p value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1709.13 P 0.000224668
AFFX-BioB-M_at 2091.16 P 4.42873e-05
AFFX-BioB-3_at 1749.48 P 7.00668e-05
AFFX-BioC-5_at 5761.35 P 5.16732e-05
AFFX-BioC-3_at 5166.68 P 4.42873e-05
AFFX-BioDn-5_at 10340.5 P 4.42873e-05
AFFX-BioDn-3_at 17732.1 P 6.02111e-05
AFFX-CreX-5_at 48766.5 P 5.16732e-05
AFFX-CreX-3_at 56383.8 P 4.42873e-05
AFFX-DapX-5_at 1091.94 P 4.42873e-05
AFFX-DapX-M_at 2493.01 P 0.000340305
AFFX-DapX-3_at 4429.19 P 6.02111e-05
AFFX-LysX-5_at 159.671 P 0.00110197
AFFX-LysX-M_at 253.99 P 0.0125468
AFFX-LysX-3_at 498.658 P 0.000126798
AFFX-PheX-5_at 194.19 P 0.00010954
AFFX-PheX-M_at 244.212 P 0.00359458
AFFX-PheX-3_at 633.68 P 0.000445901
AFFX-ThrX-5_at 505.872 P 0.000340305
AFFX-ThrX-M_at 556.207 P 5.16732e-05

Total number of rows: 24128

Table truncated, full table size 861 Kbytes.




Supplementary file Size Download File type/resource
GSM234933.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM234933.CHP.gz 5.6 Mb (ftp)(http) CHP
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap